Sinan U Umu, Karoline Rapp Vander-Elst, Victoria T Karlsen, Manto Chouliara, Espen Sønderaal Bækkevold, Frode Lars Jahnsen, Diana Domanska, Cellsnake: a user-friendly tool for single-cell RNA sequencing analysis, GigaScience, Volume 12, 2023, giad091, https://doi.org/10.1093/gigascience/giad091
2023
hGSuite HyperBrowser: A web-based toolkit for hierarchical metadata-informed analysis of genomic tracks
Kalyanasundaram S, Lefol Y, Gundersen S, Rognes T, Alsøe L, Nilsen HL, Hovig E, Sandve GK, Domanska D. hGSuite HyperBrowser: A web-based toolkit for hierarchical metadata-informed analysis of genomic tracks. PLoS One. 2023 Jul 19;18(7):e0286330. doi: 10.1371/journal.pone.0286330. PMID: 37467208; PMCID: PMC10355376.
A Roadmap for the Human Gut Cell Atlas
Zilbauer, M., James, K.R., Kaur, M. et al. A Roadmap for the Human Gut Cell Atlas. Nat Rev Gastroenterol Hepatol 20, 597–614 (2023). https://doi.org/10.1038/s41575-023-00784-1
TiSA: TimeSeriesAnalysis-a pipeline for the analysis of longitudinal transcriptomics data
TiSA: TimeSeriesAnalysis-a pipeline for the analysis of longitudinal transcriptomics data, NAR Genom Bioinform, 5 (1), DOI 10.1093/nargab/lqad020, PubMed 36879899