JahnsenLab with new paper on regulatory T cells in the gut. Click here to read more.
Diana and Umair win prize for best scientific paper at Oslo University Hospital in 2022

Diana and Umair win prize for best scientific paper at Oslo University Hospital in 2022

TiSA: TimeSeriesAnalysis-a pipeline for the analysis of longitudinal transcriptomics data
TiSA: TimeSeriesAnalysis-a pipeline for the analysis of longitudinal transcriptomics data, NAR Genom Bioinform, 5 (1), DOI 10.1093/nargab/lqad020, PubMed 36879899
Congratulations to Naveen Parmar
Naveen participated in sixth annual conference organized by Digital Life Norway Research School ( 13-15 June 2022) and his colonoids confocal image was awarded best scientific image award. He received 5000 NOK as a prize money for his confocal image.

Human gut mini organ- Colonoid
Green (Ki67) shows cells are in proliferation stage.
Red is Rhodamine-phalloidin binds to actin.
Blue is DNA
Raquel Bartolomé-Casado in collaboration with the Powrie lab publish a new paper on Tregs in mouse intestine
Raquel Bartolomé-Casado in collaboration with the Powrie lab publish a new paper on Tregs in mouse intestine. You can read about it here.
JahnsenLab reports single cell data on celiac disease
JahnsenLab reports single cell data on celiac disease. Click here to read more.
JEM Clinical Immunology Collection 2022
Research article: Diana Domanska, Umair Majid, Victoria T. Karlsen, Marianne A. Merok, Ann-Christin Røberg Beitnes, Sheraz Yaqub, Espen S. Bækkevold, Frode L. Jahnsen; Single-cell transcriptomic analysis of human colonic macrophages reveals niche-specific subsets. J Exp Med 7 March 2022; 219 (3): e20211846. doi: https://doi.org/10.1084/jem.20211846 is highlighted in JEM Clinical Immunology Collection 2022.
MirGeneDB 2.1: toward a complete sampling of all major animal phyla
Bastian Fromm, Eirik Høye, Diana Domanska, Xiangfu Zhong, Ernesto Aparicio-Puerta, Vladimir Ovchinnikov, Sinan U Umu, Peter J Chabot, Wenjing Kang, Morteza Aslanzadeh,
Marcel Tarbier, Emilio Mármol-Sánchez, Gianvito Urgese, Morten Johansen, Eivind Hovig, Michael Hackenberg, Marc R Friedländer, Kevin J Peterson, MirGeneDB 2.1: toward a complete sampling of all major animal phyla, Nucleic Acids Research, Volume 50, Issue D1, 7 January 2022, Pages D204–D210, https://doi.org/10.1093/nar/gkab1101
A comprehensive framework for analysis of microRNA sequencing data in metastatic colorectal cancer
Eirik Høye, Bastian Fromm, Paul HM Böttger, Diana Domanska, Annette Torgunrud, Christin Lund-Andersen, Torveig Weum Abrahamsen, Åsmund Avdem Fretland, Vegar J Dagenborg, Susanne Lorenz, Bjørn Edwin, Eivind Hovig, Kjersti Flatmark, A comprehensive framework for analysis of microRNA sequencing data in metastatic colorectal cancer, NAR Cancer, Volume 4, Issue 1, March 2022, zcab051, https://doi.org/10.1093/narcan/zcab051
Member Spotlight – Raquel Bartolomé Casado, PhD
Raquel is interested in studying the immune cells that are permanently lodged in the human intestinal mucosa. To read more click here.